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ACD
acdc
acdpretty
acdtable
acdtrace
acdvalid
ALIGNMENT CONSENSUS
cons
megamerger
merger
ALIGNMENT DIFFERENCES
diffseq
ALIGNMENT DOT PLOTS
dotmatcher
dotpath
dottup
polydot
ALIGNMENT GLOBAL
est2genome
needle
stretcher
ALIGNMENT LOCAL
matcher
seqmatchall
supermatcher
water
wordfinder
wordmatch
ALIGNMENT MULTIPLE
edialign
emma
infoalign
plotcon
prettyplot
showalign
tranalign
DISPLAY
abiview
cirdna
lindna
pepnet
pepwheel
prettyplot
prettyseq
remap
seealso
showalign
showdb
showfeat
showseq
sixpack
textsearch
EDIT
biosed
codcopy
cutseq
degapseq
descseq
entret
extractalign
extractfeat
extractseq
listor
makenucseq
makeprotseq
maskfeat
maskseq
newseq
noreturn
notseq
nthseq
pasteseq
revseq
seqret
seqretsplit
skipseq
splitter
trimest
trimseq
union
vectorstrip
yank
ENZYME KINETICS
findkm
FEATURE TABLES
coderet
extractfeat
maskfeat
showfeat
twofeat
INFORMATION
infoalign
infoseq
seealso
showdb
textsearch
tfm
whichdb
wossname
NUCLEIC 2D STRUCTURE
einverted
NUCLEIC CODON USAGE
cai
chips
codcmp
cusp
syco
NUCLEIC COMPOSITION
banana
btwisted
chaos
compseq
dan
freak
isochore
sirna
wordcount
NUCLEIC CPG ISLANDS
cpgplot
cpgreport
geecee
newcpgreport
newcpgseek
NUCLEIC GENE FINDING
getorf
marscan
plotorf
showorf
sixpack
syco
tcode
wobble
NUCLEIC MOTIFS
dreg
fuzznuc
fuzztran
marscan
NUCLEIC MUTATION
msbar
shuffleseq
NUCLEIC PRIMERS
eprimer3
primersearch
stssearch
NUCLEIC PROFILES
profit
prophecy
prophet
NUCLEIC REPEATS
einverted
equicktandem
etandem
palindrome
NUCLEIC RESTRICTION
recoder
redata
remap
restover
restrict
showseq
silent
NUCLEIC TRANSCRIPTION
tfscan
NUCLEIC TRANSLATION
backtranambig
backtranseq
coderet
plotorf
prettyseq
remap
showorf
showseq
sixpack
transeq
PHYLOGENY MOLECULAR SEQUENCE
distmat
PROTEIN 2D STRUCTURE
garnier
helixturnhelix
hmoment
pepcoil
pepnet
pepwheel
tmap
PROTEIN 3D STRUCTURE
psiphi
PROTEIN COMPOSITION
backtranambig
backtranseq
charge
checktrans
compseq
emowse
freak
iep
mwcontam
mwfilter
octanol
pepinfo
pepstats
pepwindow
pepwindowall
PROTEIN MOTIFS
antigenic
digest
epestfind
fuzzpro
fuzztran
helixturnhelix
oddcomp
patmatdb
patmatmotifs
pepcoil
preg
pscan
sigcleave
PROTEIN MUTATION
msbar
shuffleseq
PROTEIN PROFILES
profit
prophecy
prophet
aaindexextract
prosextract
dbifasta
dbxfasta
dbxflat
dbxgcg
UTILS MISC
embossdata
embossversion
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