twofeat

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(Finds neighbouring pairs of features in sequences)
Fields with a coloured background are optional and can safely be ignored...
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1. Set the parameters for the run (or accept the defaults...)
input section
Select a set of sequences.

Use one of the following three fields:  

  1. To access a sequence from a database, enter the USA path here: (dbname:entry)

  2. Or, upload a sequence file from your local computer here:

  3. Or enter the sequence data manually here:
afeaturesection section
Source of first feature  
 
Type of first feature  
 
Sense of first feature
Minimum score of first feature   (real number)    
Maximum score of first feature   (real number)    
Tag of first feature  
 
Value of first feature's tags  
 
bfeaturesection section
Source of second feature  
 
Type of second feature  
 
Sense of second feature
Minimum score of second feature   (real number)    
Maximum score of second feature   (real number)    
Tag of second feature  
 
Value of second feature's tags  
 
featurerelationsection section
Specify overlap
The minimum distance between the features   (integer)    
The maximum distance between the features   (integer)    
Specify position
Specify sense
Specify order
output section
Error
unknown datatype 'toggle'
Name of the output new feature  
 
Report format:
2. Submit to twofeat...
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