dotmatcher

 Open help window for dotmatcher

(Displays a thresholded dotplot of two sequences)
Fields with a coloured background are optional and can safely be ignored...
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1. Set the parameters for the run (or accept the defaults...)
input section
Select an input sequence.

Use one of the following three fields:  

  1. To access a sequence from a database, enter the USA path here: (dbname:entry)

  2. Or, upload a sequence file from your local computer here:

  3. Or enter the sequence data manually here:
Select an input sequence.

Use one of the following three fields:  

  1. To access a sequence from a database, enter the USA path here: (dbname:entry)

  2. Or, upload a sequence file from your local computer here:

  3. Or enter the sequence data manually here:
Matrix file  
  or select a matrix file to upload here:  
  (file must contain an integer scoring matrix)
additional section
Window size over which to test threshhold   (integer)    
Threshold   (integer)    
output section
Error
unknown datatype 'toggle'
Output graphic format  
Output graphic format  
2. Submit to dotmatcher...
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