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(Display a DNA sequence with 6-frame translation and ORFs)

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1. Set the parameters for the run (or accept the defaults...)
input section
Select an input sequence.

Use one of the following three fields:   (file must contain a DNA sequence)

  1. To access a sequence from a database, enter the USA path here: (dbname:entry)

  2. Or, upload a sequence file from your local computer here:

  3. Or enter the sequence data manually here:

additional section
Code to use
ORF at the beginning of the sequence?  
ORF at the end of the sequence?  
ORF start with an M?  
output section
Output file name  
Output file format:
Display translation of reverse sense?  
Minimum size of ORFs   (integer)    
Regions to put in uppercase (eg: 4-57,78-94)  
  (If this is left blank, then the sequence case is left alone.)
Regions to colour in HTML (eg: 4-57 red 78-94 green)  
Number the sequences?  
Width of sequence to display   (integer)    
Line length of page (0 for indefinite)   (integer)    
Margin around sequence for numbering.   (integer)    
Display sequence ID?  
Display description?  
Offset to start numbering the sequence from   (integer)    
Use HTML formatting?  
2. Submit to sixpack...
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