checktrans

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(Reports STOP codons and ORF statistics of a protein)

Fields with a coloured background are optional and can safely be ignored...
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1. Set the parameters for the run (or accept the defaults...)
input section
Select a set of sequences.

Use one of the following three fields:  

  1. To access a sequence from a database, enter the USA path here: (dbname:entry)

  2. Or, upload a sequence file from your local computer here:

  3. Or enter the sequence data manually here:


required section
Minimum ORF Length to report   (integer)    
additional section
Force the sequence to end with an asterisk?  
output section
Output file name  
Output file format:
Feature output format:
Separate files for each entry?  
2. Submit to checktrans...
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