prophet

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(Gapped alignment for profiles)

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1. Set the parameters for the run (or accept the defaults...)
input section
Select a set of sequences.

Use one of the following three fields:  

  1. To access a sequence from a database, enter the USA path here: (dbname:entry)

  2. Or, upload a sequence file from your local computer here:

  3. Or enter the sequence data manually here:


Profile or weight matrix file  
 
required section
Gap opening coefficient   (real number)    
Gap extension coefficient   (real number)    
output section
Alignment format:
2. Submit to prophet...
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