abiview
(Reads ABI file and display the trace)
Fields with a coloured background are optional and can safely be ignored...
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1. Set the parameters for the run (or accept the defaults...)
input section
ABI sequencing trace file
output section
Output file format:
GCG 9.x/10.x
GCG 8.x
EMBL
SwissProt
Pearson FASTA
NCBI FASTA
NBRF (PIR)
GENBANK
Intelligenetics
CODATA
DNA strider
ACeDB
Staden experiment
plain text
Fitch
GCG MSF
Clustal .aln
PHYLIP interleaved
PHYLIP non-interleaved
ASN.1
Hennig86
Mega
Meganon
Nexus/PAUP
Nexusnon/PAUPnon
Jackknifer
Jackknifernon
Treecon
EMBOSS object
Output graphic format
postscript
PNG
First base to report or display (integer)
Last base to report or display (integer)
Separate the trace graphs for the 4 bases?
Yes
No
Display y-axis ticks?
Yes
No
Display the sequence on the graph?
Yes
No
Sequence display window size (integer)
Base graphs to be displayed
2. Submit to abiview...
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