Alignment Analysis
  Computational Immunology
  Modeling & 3D-structure     Analysis
  Sequence Manipulation &     Analysis
  Similarity Searches
  View all Tools
 Tools    >> Tapreg

This server computes binding affinity of peptides to TAP (Transporter Associated with Antigen Processing) using a Support Vector Machine model.
E-MAIL Help about email
Enter your e-mail (optional)

THRESHOLD Help about threshold  Affinity threshold (IC50)

MODELS Help about models DS_613 Sparse  Help about DS_613 Sparse model DS_613 Blosum  Help about DS_613 Blosum model

INPUT Help about input
Protein:9 mers Protein:9 mers + extensions

Paste your sequence(s) (FASTA Format)
or Upload sequence(s) Help about upload   

  • Diez-Rivero CM, Chenlo B, Zuluzga P and Reche PA (2010) Quantitative modeling of peptide binding to TAP using support vector machine. Proteins, 78:63-72
Credits & Complaints: Pedro A. Reche

Hits since Mar/2009 Last updated:

Contact Us    |   Immunomedicine Group    |