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| Tools |
>> Computational Immunology |
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Antigenic Peptide Prediction |
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An antigen prediction tool that follows the Kolaskar and Tongaonkar (1990) method is available from our antigenic site.
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A tool designed to aid in the development of multi-epitope vaccines against pathogenic organisms based on genome-wide predictions of promiscous MHCI-restricted epitopes [Restricted Access].
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A server which calculates the variability from multiple sequence alignment using the Shannon entropy (H) function, the Simpson entropy function and the Wu-Kabat entropy function.
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Predicts MHC binding peptides from an input protein based on their similarity to a set of peptides known to bind to a given MHC molecule. Similarity is scored using Position Specific Scoring Matrixes (PSSM) derived from the aligned peptides known to bind to that MHC molecule.
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This server calculates epitopes that can be transported by TAP. It can also
predict the HLA-I molecules to which the epitopes bind.
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HLAV3D: HLA Squence Variability in 3D |
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A tool that creates a three dimensional representation of variability in HLA molecules
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