Alignment Analysis
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 Tools    >> Proteasome Cleavage Prediction Server

Cleavage models Help about email
Threshold Help about input
Input Help about input
Replace example sequence with your sequence(s)
or Upload sequence(s) from local file
1. Browse File: 2: Load File Help about upload

OUTPUT Help about input
Residues Cleavage Sites per residue

Peptides   Peptides with Cleavage sites at C-terminus
Filter Discard Peptides with internal cleavage sites I-Threshold Help about input
  • Diez-Rivero CM, Lafuente EM, Reche PA. Computational analysis and modeling of cleavage by the immunoproteasome and the constitutive proteasome. BMC Bioinformatics. 2010 Sep 23;11:479. doi: 10.1186/1471-2105-11-479. PMID: 20863374; PMCID: PMC2955702
  • Gomez-Perosanz M, Ras-Carmona A, Reche PA. PCPS: A Web Server to Predict Proteasomal Cleavage Sites. Methods Mol Biol. 2020;2131:399-406. doi: 10.1007/978-1-0716-0389-5_23. PMID: 32162269.
  • Gomez-Perosanz M, Ras-Carmona A, Lafuente EM, Reche PA. Identification of CD8+ T cell epitopes through proteasome cleavage site predictions. BMC Bioinformatics. 2020 Dec 14;21(Suppl 17):484. doi: 10.1186/s12859-020-03782-1. PMID: 33308150; PMCID: PMC7733697.
Praises and Complaints: Pedro A. Reche
Hits since May/2009
Last updated:

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