Tools >> The Sequence Manipulation Suite

Tools

Alignment Analysis

Databases

Computational Immunology

Modelling & 3D-structure Analysis

Sequence Manipulation & Analysis

Similarity Searches

View all Tools

Tools

>> The Sequence Manipulation Suite

Group DNA

Group DNA adjusts the spacing of DNA sequences and adds numbering. You can specify the group size (the number of residues per group), as well as the number of residues per line. The output of this program can serve as a convenient reference for use with some of the other programs in the Sequence Manipulation Suite (such as DNA Pattern Find), since the numbering and spacing allows you to quickly locate specific residues.

Paste the raw or FASTA sequence into the text area below. >CDS /gene="fem-2" (exons highlighted in uppercase by GenBank Feature Extractor) gaacgcgaatgcctctctctctttcgatgggtatgccaattgtccacattcactcgtgttgcctcctctttgccaacacgcaagacaccagaaacgcgtcaaccaaagagaaaaagacgccgacaacgggcagcactcgcgagagacaaaggttatcgcgttgtgttattatacattcgcatccgggtcaactttagtccgttgaacatgcttcttgaaaacctagttctcttaaaataacgttttagaagttttggtcttcagATGTCTGATTCGCTAAATCATCCATCGAGTTCTACGGTGCATGCAGATGATGGATTCGAGCCACCAACATCTCCGGAAGACAACAACAAAAAACCGTCTTTAGAACAAATTAAACAGGAAAGAGAAGCGTTGTTTACGgttagttacctattagctgcaagttttgaaaaagcggaatctgtaaaaagcggaatctgtaaaaaaaacatctaaggaataattctgaaaagaaaaagtttctaaatgttaatcggaatccaatttttatgaaattatttaaaaaaaaactaaaattagtttctaaaaaatttttctaaagtaattggaccatgtgaaggtacacccacttgttccaatatgccatatctaactgtaaaataatttgattctcatgagaatatttttcagGATCTATTCGCAGATCGTCGACGAAGCGCTCGTTCTGTGATTGAAGAAGCTTTCCAAAACGAACTCATGAGTGCTGAACCAGTCCAGCCAAACGTGCCGAATCCACATTgtgagttggaaatttttatttgataaccaagagaaaaaaagttctacctttttttcaaaaacctttccaaaaatgattccatctgatataggattaagaaaaatattttccgaaatctctgcttttcagCGATTCCCATTCGTTTCCGTCATCAACCAGTTGCTGGACCTGCTCATGATGTTTTCGGAGACGCGGTGCATTCAATTTTTCAAAAAATAATGTCCAGgtatacactatttttgcatatttttcttgccaaatttggtcaaaaaccgtagtacaacccaaaaagtttcttcatttcagAGGAGTGAACGCGGATTATAGTCATTGGATGTCATATTGGATCGCGTTGGGAATCGACAAAAAAACACAAATGAACTATCATATGAAACCGTTTTGCAAAGATACTTATGCAACTGAAGGCTCCTTAGgtaggttagtcttttctaggcacagaagagtgagaaaattctaaatttctgagcagtctgctttttgttttccttgagtttttacttaaagctcttaaaagaaatctaggcgtgaagttcgagccttgtaccataccacaacagcattccaaatgttacagAAGCGAAACAAACATTTACTGATAAAATCAGGTCAGCTGTTGAGGAAATTATCTGGAAGTCCGCTGAATATTGTGATATTCTTAGCGAGAAGTGGACAGGAATTCATGTGTCGGCCGACCAACTGAAAGGTCAAAGAAATAAGCAAGAAGATCGTTTTGTGGCTTATCCAAATGGACAATACATGAATCGTGGACAGgttagtgcgaatcggggactcaagatttactgaaatagtgaagagaaaacaaaagaaaactatattttcaaaaaaaatgagaactctaataaacagaatgaaaaacattcaaagctacagtagtatttccagctggagtttccagagccaaaaaaatgcgagtattactgtagttttgaaattggtttctcactttacgtacgattttttgatttttttttcagactcttcatatgaaaaaaaatcatgttttctcctttacaagatttttttgatctcaaaacatttccagAGTGACATTTCACTTCTTGCGGTGTTCGATGGGCATGGCGGACACGAGTGCTCTCAATATGCAGCTGCTCATTTCTGGGAAGCATGGTCCGATGCTCAACATCATCATTCACAAGATATGAAACTTGACGAACTCCTAGAAAAGGCTCTAGAAACATTGGACGAAAGAATGACAGTCAGAAGTGTTCGAGAATCTTGGAAAGGTGGAACCACTGCTGTCTGCTGTGCTGTTGATTTGAACACTAATCAAATCGCATTTGCCTGGCTTGGAGATTCACCAGGgtaatcaatttttttttagtttttggaactttacgtcccgaaaaattattcctttatcacctaattcctacagtaacccaagctccgaattaaataaagttaaagcgtggtatacacataaaaataagaaaaaattgttcatgaaatccatttttccagTTACATCATGTCAAACTTGGAGTTCCGCAAATTCACTACTGAACACTCCCCGTCTGACCCGGAGGAATGTCGACGAGTCGAAGAAGTCGGTGGCCAGATTTTTGTGATCGGTGGTGAGCTCCGTGTGAATGGAGTACTCAACCTGACGCGAGCACTAGGAGACGTACCTGGAAGACCAATGATATCCAACAAACCTGATACCTTACTGAAGACGATCGAACCTGCGGATTATCTTGTTTTGTTGGCCTGTGACGGGATTTCTGACGTCTTCAACACTAGTGATTTGTACAATTTGGTTCAGGCTTTTGTCAATGAATATGACGTAGAAGgtatcaaactgatcgtttttcacatcacaaaattcttgaattttccagATTATCACGAACTTGCACGCTACATTTGCAATCAAGCAGTTTCAGCTGGAAGTGCTGACAATGTGACAGTAGTTATAGGTTTCCTCCGTCCACCAGAAGACGTTTGGCGTGTAATGAAAACAGACTCGGATGATGAAGAGAGCGAGCTCGAGGAAGAAGATGACAATGAATAGtttattgcaagttttccaaaacttttccaatttccctgggtattgattagcatccatatcttacggcgattatatcaattgtaacattatttctgtttctccccccacctctcaaattttcaaatgaccctttttcttttcgtctacctgtatcgttttccattcatctccccccctccactgtggtatatcattttgtcattagaaagtattattttgattttcattggcagtagaagacaacaggatacagaagaggttttcacag

Use a group size of and show bases per line.


Contact Us \| Immunomedicine Group \|